Function reference • hictkR

All functions

File(): Open a .hic or .cool file for reading

MultiResFile(): Opena a .mcool file for reading

SingleCellFile(): Opena a .scool file for reading

fetch(): Fetch interactions from a File object

hictkR hictkR-package: hictkR: R bindings for hictk

hictkR_open(): Open files in .cool, .mcool, .scool, and .hic format

is_cooler(): Test whether a file is in .cool format

is_hic_file(): Test whether a file is in .cool format

is_multires_file(): Test whether a file is in .mcool format

is_scool_file(): Test whether a file is in .cool format